Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818534.1_cds_XP_016499665.1_13566
CDS Infomation

[gene=LOC107818226] [db_xref=GeneID:107818226] [protein=aspartyl protease family protein 2-like] [protein_id=XP_016499665.1] [location=8869..10530] [gbkey=CDS]
Sequence

ATGTTCCGACTAGTAATGGTGACAAAGTTTAGTATTTTTATTTTGGTGGTGTTGTTGAGG
TTATTTTCATTTGGTTTTGTAGCCTCAAGAGAAATTCACAATTTTGGTATTAATCTGAAT
TTTAGTGCTTCTGGTATTGAATTCCCTCAACATCCAAGCTTCAACTCTGTTACTGCTTCT
GGAAATTCAGATTGCAGTTATGGAACATCCAAGAAATCAACAACCACCCATGTAATAACT
CAAGAAGAAAATAATTCTGATGAAAAAGAAGATGAAGATTTAATGGTATCTGAAAACCAG
CCAAGAGAAGCAGTCAAGTTTCACTTAAGGCACAGATCAGCTGGTCAAAATATAGAGGCC
AAAGACTCAATATTTGAGTCCACAACAAGGGACTTGGGTAGAATTCAGACATTGCATACA
AGGATTGTAGAGAAAAAGAATCAGAACTTTATTTCAAGGCAAACAAAAAATAGTGAAAAA
ACTACACAATCTTCTTCATTTGAATTCTCAGGTAAGCTCATGGCAACATTAGAGTCAGGT
GTGAGTCATGGTTCAGGGGAGTATTTCATGGATGTTTTTGTTGGTACACCTCCTAAACAC
TTCTCTTTGATTCTTGATACTGGTAGTGATCTTAATTGGATTCAATCTGTTCCTTGTTAT
GATTGTTTTGAACAAAATGGTCCTCATTATGATCCTAAGGATTCTATCTCTTTCAAGAAT
ATAAGTTGCGATGATCCGAGGTGTCACCTTGTTTCATCTCCTGACCCTCCACAGCCTTGC
AAGTCTGAAAACCAGACTTGCCCTTATTACTATTGGTATGGAGACAGCTCGAACACGACT
GGTGATTTCGCGCTTGAGACGTTCACGGTTAATCTCACAACCCCTAATGGGGATTCAGAG
ATCAAGAAAGTGGAAAATGTGATGTTTGGTTGTGGACATTGGAATAGAGGCTTATTTCAT
GGTGCTGCTGGTTTGTTAGGACTTGGTAGAGGACCTCTTTCGTTTTCGTCTCAGCTTCAA
TCTTTATATGGCCATTCCTTTTCGTATTGTTTGGTTAATAGGAACAGCAATTCTAGTGTA
AGCAGCAAGTTGATTTTTGGTGAAGATAAGGAACTCTTGAAACACCTGAATTTGAATTTC
ACTTCATTGGTTGGTGGGAAAGAAAATCATTTGGAAACATTCTATTATGTGCAGATAAAA
TCAGTTATAGTTGGAGGTGAAGTGCTGAATATACCTGAGGAGACATGGAATTTGTCTACA
GAAGGTGTTGGTGGAACGATCATCGATTCAGGAACCACTTTGAGCTATTTTGCAGAACCA
GCATATGAGATTATAAAACAGGCATTTGTTAACAAGGTGAAGCGCTATCCTATTTTAGAT
GATTTTCCAATTTTGAAACCATGTTACAATGTTTCTGGAGTGGAGAAACTTGAATTGCCT
TCATTTGGGATAGTTTTTGGTGATGGAGCTATATGGACTTTTCCAGTAGAGAACTACTTC
ATCAAACTTGAACCAGAGGACATTGTTTGTTTGGCAATTTTAGGAACTCCTCATTCGGCC
ATGTCGATAATTGGCAACTACCAACAGCAGAATTTTCATATCTTATATGACACCAAAAGG
TCAAGGCTGGGATTTGCACCAAGAAGATGTGCTGATGCCTGA

Peptide Sequence

PEP ID

XP_016499665.1
PEP Infomation

PREDICTED: aspartyl protease family protein 2-like [Nicotiana tabacum]
Sequence

MFRLVMVTKFSIFILVVLLRLFSFGFVASREIHNFGINLNFSASGIEFPQHPSFNSVTAS
GNSDCSYGTSKKSTTTHVITQEENNSDEKEDEDLMVSENQPREAVKFHLRHRSAGQNIEA
KDSIFESTTRDLGRIQTLHTRIVEKKNQNFISRQTKNSEKTTQSSSFEFSGKLMATLESG
VSHGSGEYFMDVFVGTPPKHFSLILDTGSDLNWIQSVPCYDCFEQNGPHYDPKDSISFKN
ISCDDPRCHLVSSPDPPQPCKSENQTCPYYYWYGDSSNTTGDFALETFTVNLTTPNGDSE
IKKVENVMFGCGHWNRGLFHGAAGLLGLGRGPLSFSSQLQSLYGHSFSYCLVNRNSNSSV
SSKLIFGEDKELLKHLNLNFTSLVGGKENHLETFYYVQIKSVIVGGEVLNIPEETWNLST
EGVGGTIIDSGTTLSYFAEPAYEIIKQAFVNKVKRYPILDDFPILKPCYNVSGVEKLELP
SFGIVFGDGAIWTFPVENYFIKLEPEDIVCLAILGTPHSAMSIIGNYQQQNFHILYDTKR
SRLGFAPRRCADA

Transcript Sequence

Gene sequence data has not been registered.